DATA-breastcancer: Gene expression signatures for p53 mutation status in 250...
In gRbase: A package for graphical modelling in R
Description
Usage
Format
Details
Source
References
Examples
Description
Perturbations of the p53 pathway are associated with more aggressive
and therapeutically refractory tumours. We preprocessed the data using
Robust Multichip Analysis (RMA). Dataset has been truncated to the 1000 most
informative genes (as selected by Wilcoxon test statistics) to simplify
computation. The genes have been standardised to have zero mean and unit
variance (i.e. z-scored).
Usage
1
Format
A data frame with 250 observations on the following 1001 variables.
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codea factor with levels case control
Details
The factor code defines whether there was a mutation in the
p53 sequence (code=case) or not (code=control).
Source
Dr. Chris Holmes, c.holmes at stats dot. ox . ac .uk
References
Miller et al (2005, PubMed ID:16141321)
Examples
1
2
data(breastcancer)
## maybe str(breastcancer) ; plot(breastcancer) ...
gRbase documentation built on May 2, 2019, 4:51 p.m.
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Description Usage Format Details Source References Examples
Description
Perturbations of the p53 pathway are associated with more aggressive and therapeutically refractory tumours. We preprocessed the data using Robust Multichip Analysis (RMA). Dataset has been truncated to the 1000 most informative genes (as selected by Wilcoxon test statistics) to simplify computation. The genes have been standardised to have zero mean and unit variance (i.e. z-scored).
Usage
1 |
Format
A data frame with 250 observations on the following 1001 variables.
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codea factor with levels
casecontrol
Details
The factor code defines whether there was a mutation in the
p53 sequence (code=case) or not (code=control).
Source
Dr. Chris Holmes, c.holmes at stats dot. ox . ac .uk
References
Miller et al (2005, PubMed ID:16141321)
Examples
1 2 | data(breastcancer)
## maybe str(breastcancer) ; plot(breastcancer) ...
|
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