gibbsmat: Plot Gibbs sampler output

In mixstock: functions for mixed stock analysis

Description

plot or report on output from Gibbs sampler

Usage

gibbsmat(x, burnin = 500, R = 2, H = 2, trans = TRUE)
gibbsrpt(x,burnin=500,R=2,H=2,trans=TRUE,plot=TRUE)
plotvar(vec,best,name,...)

Arguments

x	results of an MCMC fit
burnin	length of burn-in period for chain
R	number of rookeries
H	number of haplotypes
trans	transform chain values?
plot	plot posterior distributions for each variable?
vec	numeric vector (posterior distribution chain)
best	best-fit/point estimate value
name	name of variable, for x label
...	other arguments to plot

Value

sets up an array of plots on the current output device

mixstock documentation built on May 2, 2019, 6:48 p.m.