simex: A small sample mixed stock analysis data set

In mixstock: functions for mixed stock analysis

Description

This data set is just a small example, generated with four markers (haplotypes) and two sources (rookeries: four markers later condensed with markfreq.condense to three), using true marker frequencies {0.65,0.33,0.01,0.1} in rookery A and {0.33,0.65,0.01,0.1} in rookery B; and true contributions of 90% from rookery A and 10% from rookery B. In other words, it was generated with the commands true.freq <- matrix(c(0.65, 0.33, 0.01, 0.01, 0.33, 0.65, 0.01, 0.01), ncol = 2) true.contrib <- c(0.9, 0.1) simmixstock0(true.freq, true.contrib, sourcesampsize = 50, mixsampsize = 100, rseed = 1004)

Usage

data(simex)

Format

an object, called simex, of class mixstock.data

mixstock documentation built on May 2, 2019, 6:48 p.m.