Description Usage Arguments Value
takes a parameter vector corresponding to the (possibly transformed) source contributions and source marker frequencies and returns the negative log likelihood
1 2 |
p |
parameter vector |
sourcesamp |
source marker samples |
mixsamp |
mixed stock samples |
verbose |
verbose output? |
transf |
transformation: "full", "part", or "none" |
full |
full likelihood (including normalization constants?) |
cond |
conditional likelihood (not including source sample likelihood? |
debug |
debugging output? |
numeric value of the negative log-likelihood
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