AIC.mixstock.est: commands for mixed stock analysis estimates

In mixstock: functions for mixed stock analysis

Description

calculate AIC, confidence intervals, etc., for mixed stock analysis estimates

Usage

## S3 method for class 'mixstock.est'
AIC(object, ...)
## S3 method for class 'mixstock.est'
boxplot(x,...)
## S3 method for class 'mixstock.est'
coef(object,...)
## S3 method for class 'mixstock.est'
logLik(object,...)
## S3 method for class 'mixstock.est'
confint(object,parm,level=0.95,profile=FALSE,type=c("quantile","credible"),
show.sourcectr=TRUE,show.haps=FALSE,...)
## S3 method for class 'mixstock.est'
summary(object,show.data=TRUE,...)
as.mixstock.est(object)

Arguments

object	mixed stock analysis estimate
x	mixed stock analysis estimate
parm	parameter
level	confidence level
profile	confidence intervals by likelihood profiling? (stub)
type	for MCMC runs, produce credible intervals or quantiles of chains?
show.sourcectr	show confidence intervals for source-centric estimates?
show.haps	show confidence limits for marker frequencies?
show.data	print data in summary?
...	additional arguments

Value

Various summary statistics retrieved from mixed stock analysis estimates

Note

AIC and logLik return statistical values etc. ... many of these are stubs

Author(s)

Ben Bolker

mixstock documentation built on May 2, 2019, 6:48 p.m.