plots the results of calls to the sensitivity functions.

Description

Functions used to plot the objects created by the sensitivityPStrat family of functions.

Usage

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## S3 method for class 'sensitivity.1.0d'
plot(x, xlim, ylim,
     xlab = expression(beta), ylab = "ACE",
     display = c("analytic", "bootstrap"),
     col = "black", line.col = col, point.col = col,
     analytic.col = "red", analytic.line.col = analytic.col,
     analytic.point.col = analytic.col,
     bootstrap.col = "green", bootstrap.line.col = bootstrap.col,
     bootstrap.point.col = bootstrap.col,
     panel.last = NULL, type = "l", ...)

## S3 method for class 'sensitivity.2.0d'
plot(x, xlim, ylim, xlab = expression(beta[0]), ylab = expression(beta[1]),
     display = c("analytic", "bootstrap"), col = c(gray(.9), gray(1), gray(.8)),
     panel.last = NULL, ...)

## S3 method for class 'sensitivity.1.1d'
plot(x, xlim, ylim,
     xlab = expression(beta), ylab = "SCE",
     t.point, display = c("analytic", "bootstrap"),
     col = "black", line.col = col, point.col = col,
     analytic.col = "red", analytic.line.col = analytic.col,
     analytic.point.col = analytic.col,
     bootstrap.col = "green", bootstrap.line.col = bootstrap.col,
     bootstrap.point.col = bootstrap.col,
     panel.last = NULL, type = "l", ...)

Arguments

x

sensitivity object

t.point

the time point at which data to create the plot.

display

character vector. Controlls which confidence interval to use plot.

line.col

the color all the lines should be.

point.col

the color all the infinity points should be.

analytic.col

the color of all of the analytic confidence interval markings

analytic.line.col

the color of all of the analytic confidence interval lines

analytic.point.col

the color of all of the analytic confidence interval infinity points

bootstrap.col

the color of all of the bootstrap confidence interval markings

bootstrap.line.col

the color of all of the bootstrap confidence interval lines

bootstrap.point.col

the color of all of the bootstrap confidence interval infinity points

xlim, ylim, xlab, ylab, col, panel.last, type

see plot.default

...

arguments passed to plot.default

Author(s)

Charles Dupont
Department of Biostatistics
Vanderbilt University

See Also

plot.default

Examples

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data(vaccine.trial)

ansJR<-with(vaccine.trial,
          sensitivityJR(z=treatment,s=hiv.outcome,y=logVL,
                    beta0=c(-1,-.75,-.5,-.25,0,.25,.5,.75,1),
                    beta1=c(-1,-.75,-.5,-.25,0,.25,.5,.75,1),
                    phi=c(0.95,0.90,0.80), selection="infected",
                    groupings=c("placebo","vaccine"),
                    N.boot=100)
         )

plot(ansJR)