plot.sensitivity: plots the results of calls to the sensitivity functions.

In sensitivityPStrat: Principal Stratification Sensitivity Analysis Functions

Description

Functions used to plot the objects created by the sensitivityPStrat family of functions.

Usage

## S3 method for class 'sensitivity.1.0d'
plot(x, xlim, ylim,
     xlab = expression(beta), ylab = "ACE",
     display = c("analytic", "bootstrap"),
     col = "black", line.col = col, point.col = col,
     analytic.col = "red", analytic.line.col = analytic.col,
     analytic.point.col = analytic.col,
     bootstrap.col = "green", bootstrap.line.col = bootstrap.col,
     bootstrap.point.col = bootstrap.col,
     panel.last = NULL, type = "l", ...)

## S3 method for class 'sensitivity.2.0d'
plot(x, xlim, ylim, xlab = expression(beta[0]), ylab = expression(beta[1]),
     display = c("analytic", "bootstrap"), col = c(gray(.9), gray(1), gray(.8)),
     panel.last = NULL, ...)

## S3 method for class 'sensitivity.1.1d'
plot(x, xlim, ylim,
     xlab = expression(beta), ylab = "SCE",
     t.point, display = c("analytic", "bootstrap"),
     col = "black", line.col = col, point.col = col,
     analytic.col = "red", analytic.line.col = analytic.col,
     analytic.point.col = analytic.col,
     bootstrap.col = "green", bootstrap.line.col = bootstrap.col,
     bootstrap.point.col = bootstrap.col,
     panel.last = NULL, type = "l", ...)

Arguments

x	sensitivity object
t.point	the time point at which data to create the plot.
display	character vector. Controlls which confidence interval to use plot.
line.col	the color all the lines should be.
point.col	the color all the infinity points should be.
analytic.col	the color of all of the analytic confidence interval markings
analytic.line.col	the color of all of the analytic confidence interval lines
analytic.point.col	the color of all of the analytic confidence interval infinity points
bootstrap.col	the color of all of the bootstrap confidence interval markings
bootstrap.line.col	the color of all of the bootstrap confidence interval lines
bootstrap.point.col	the color of all of the bootstrap confidence interval infinity points
xlim, ylim, xlab, ylab, col, panel.last, type	see plot.default
...	arguments passed to plot.default

Author(s)

Charles Dupont
Department of Biostatistics
Vanderbilt University

See Also

plot.default

Examples

data(vaccine.trial)

ansJR<-with(vaccine.trial,
          sensitivityJR(z=treatment,s=hiv.outcome,y=logVL,
                    beta0=c(-1,-.75,-.5,-.25,0,.25,.5,.75,1),
                    beta1=c(-1,-.75,-.5,-.25,0,.25,.5,.75,1),
                    phi=c(0.95,0.90,0.80), selection="infected",
                    groupings=c("placebo","vaccine"),
                    N.boot=100)
         )

plot(ansJR)

sensitivityPStrat documentation built on May 2, 2019, 5:14 p.m.