read.phylosim: Convert alignment to be readable for synonymous distance...
In synDss: Recombination detection using synonymous distances
Description
Usage
Arguments
Value
Description
The synonymous distance function in the robustDist package uses a 1,2,3,4 coding
for nucleotides instead of A,C,G,T. This function makes the conversion.
Usage
1
read.phylosim(alignment)
Arguments
alignment
A sequence alignment in the format of a matrix of A,C,G,T
Value
Matrix of 1,2,3,4
synDss documentation built on May 2, 2019, 5:40 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
The synonymous distance function in the robustDist package uses a 1,2,3,4 coding for nucleotides instead of A,C,G,T. This function makes the conversion.
Usage
1 | read.phylosim(alignment)
|
Arguments
alignment |
A sequence alignment in the format of a matrix of A,C,G,T |
Value
Matrix of 1,2,3,4
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.