read.agdex.result: Read the output file of agdex analysis

In AGDEX: Agreement of Differential Expression Analysis

Description

A function to read the output file produced by the function write.agdex.result

Usage

read.agdex.result(res.file)

Arguments

res.file

the name of output file of AGDEX analysis

Value

Returns a list of objects of result.

dex.compA	comparison definition for "A"
dex.compB	comparison definition for "B"
gwide.agdex.res	genome-wide AGDEX result
gset.res	gene-set Results
meta.dex.res	Individual Matched-Gene results
dex.resA	Individual Gene Results for comparison "A"
dex.resB	Individual Gene Results from comparison "B"
dex.asgnA	sample assignments for comparison "A"
dex.asgnB	aample assignments for comparison "B"
gset.listA	gene-set lists for comparison "A"
gset.listB	gene-set lists for comparison "B"
gset.list.agdex	gene-set lists for agdex analysis

Author(s)

Stan Pounds<[e-mail]; Cuilan Lani Gao<[e-mail]>

See Also

agdex;write.agdex.result

Examples

#read agdex file from output file
## Not run: 
 read.agdex.result("agdex.result.txt")
 
## End(Not run)

AGDEX documentation built on Nov. 8, 2020, 8:32 p.m.