preProcess3prime: A wrapper function to normalize the the 3 prime array

In ArrayTools: geneChip Analysis Package

Description

A wrapper function to normalize the 3 prime array by using either RMA or GCRMA method

Usage

preProcess3prime(object, method = c("rma", "gcrma"), output = FALSE, mydir = getwd())

Arguments

object	an AffyBatch.
method	either rma or gcrma
output	If output = TRUE, it will output the preprocessed data in the specified direcotry from the mydir argument
mydir	specifed directory to contain the output

Value

an ExpressionSet

Author(s)

Xiwei Wu, Arthur Li

See Also

~~objects to See Also as help, ~~~

Examples

if (require(affydata)) {
    data(Dilution)
    eset <- preProcess3prime(Dilution)
}

ArrayTools documentation built on Nov. 8, 2020, 8:13 p.m.