Description Usage Arguments Details Author(s)
These generic functions provide basic interfaces to operations on and data access to count datasets.
1 2 3 4 5 6 7 8 9 10 11 12 13 | counts(object, ...)
counts(object, ...) <- value
dispTable(object, ...)
dispTable(object, ...) <- value
sizeFactors(object, ...)
sizeFactors(object, ...) <- value
conditions(object, ...)
conditions(object, ...) <- value
design(object, ...)
design(object, ...) <- value
estimateSizeFactors(object, ...)
estimateDispersions(object, ...)
plotDispEsts(object, ...)
|
object |
Object of class for which methods are defined, e.g.,
|
value |
Value to be assigned to corresponding components of
|
... |
Further arguments, perhaps used by metohds |
For the details, please consult the manual pages of the methods in the DESeq, DESeq2, and DEXSeq packages and the package vignettes.
W. Huber, S. Anders
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