residuals: Extract model residuals

In BiocGenerics: S4 generic functions used in Bioconductor

Description

residuals is a generic function which extracts model residuals from objects returned by modeling functions.

NOTE: This man page is for the residuals S4 generic function defined in the BiocGenerics package. See ?stats::residuals for the default method (defined in the stats package). Bioconductor packages can define specific methods for objects not supported by the default method.

Usage

residuals(object, ...)

Arguments

object, ...

See ?stats::residuals.

Value

Residuals extracted from the object object.

See Also

• stats::residuals for the default residuals method.

• showMethods for displaying a summary of the methods defined for a given generic function.

• selectMethod for getting the definition of a specific method.

• residuals,PLMset-method in the affyPLM package for an example of a specific residuals method (defined for PLMset objects).

• BiocGenerics for a summary of all the generics defined in the BiocGenerics package.

Examples

residuals
showMethods("residuals")
selectMethod("residuals", "ANY")  # the default method

Example output

Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colMeans, colSums, colnames, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, lengths, mapply, match, mget, order, paste, pmax, pmax.int,
    pmin, pmin.int, rank, rbind, rowMeans, rowSums, rownames, sapply,
    setdiff, sort, table, tapply, union, unique, unsplit, which,
    which.max, which.min

standardGeneric for "residuals" defined from package "stats"

function (object, ...) 
standardGeneric("residuals")
<environment: 0x3c9f000>
Methods may be defined for arguments: object
Use  showMethods("residuals")  for currently available ones.
Function: residuals (package stats)
object="ANY"

Method Definition (Class "derivedDefaultMethod"):

function (object, ...) 
UseMethod("residuals")
<bytecode: 0x3cf1178>
<environment: namespace:stats>

Signatures:
        object
target  "ANY" 
defined "ANY" 

BiocGenerics documentation built on April 17, 2021, 6:01 p.m.