normdata: Example of normalized data

In CALIB: Calibration model for estimating absolute expression levels from microarray data

Description

Normalized data of data set RG. It is generated by function normalizeData

in the CALIB package by using calibration model parameter parameter.

Usage

data(normdata)

Format

This is a numeric matrix. Row corresponds to unique clone on the arrays and column corresponds to the two different conditions.

References

dataset RG.

dataset parameter.

Engelen, K., Naudts, B., DeMoor, B., Marchal, K. (2006) A calibration method for estimating absolute expression levels from microarray data. Bioinformatics 22: 1251-1258.

Hilson,P.,et al. (2004) Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications. Genome Res. 14, 2176-2189.

Examples

data(normdata)

plotNormalizedData(normdata,condition = c(1,2))

CALIB documentation built on Oct. 31, 2019, 3:45 a.m.