NetworkData-methods: Networks data accessor for a CeTF class object.

In CeTF: Coexpression for Transcription Factors using Regulatory Impact Factors and Partial Correlation and Information Theory analysis

Description

The networks accessor access the networks, key TFs and annotations for each gene and TF resulted from PCIT analysis and runAnalysis function analysis.

Usage

NetworkData(x, type = "network1")

## S4 method for signature 'CeTF'
NetworkData(x, type = "network1")

Arguments

x	CeTF-class object
type	Type of data: network1, network2, keytfs, tfs or annotation.The numbers 1 and 2 correspond to the respective condition (default: network1).

Value

Returns the Outputs used for RIF and PCIT.

See Also

runAnalysis.

Examples

# load the CeTF class object resulted from runAnalysis function
data(CeTFdemo)

NetworkData(CeTFdemo)

CeTF documentation built on Nov. 25, 2020, 2 a.m.