getDE-methods: Differential Expression accessor for a CeTF class object.

In CeTF: Coexpression for Transcription Factors using Regulatory Impact Factors and Partial Correlation and Information Theory analysis

Description

The DE accessor access the differential expression resulted from runAnalysis function analysis.

Usage

getDE(x, type = "unique")

## S4 method for signature 'CeTF'
getDE(x, type = "unique")

Arguments

x	CeTF-class object
type	Type of DE matrix: unique and all (default: unique)

Value

Returns the DE genes with the statistics.

See Also

runAnalysis.

Examples

# load the CeTF class object resulted from runAnalysis function
data(CeTFdemo)

getDE(CeTFdemo)

CeTF documentation built on Nov. 25, 2020, 2 a.m.