enrichPlot: Plots to visualize the enrichment analysis results

In CeTF: Coexpression for Transcription Factors using Regulatory Impact Factors and Partial Correlation and Information Theory analysis

Description

Generate three types of plots to visualize the enrichment analysis results from getEnrich function. The plots are an circular barplot, barplot and dotplot.

Usage

enrichPlot(res, showCategory = 10, type = "circle")

Arguments

res	A dataframe with getEnrich results.
showCategory	Number of enriched terms to display (default: 10).
type	Type of plot: circle, bar or dot (default: circle).

Value

Returns a circle, bar or dot plot of enrichment analysis results.

Examples

# loading enrichdemo
data(enrichdemo)

# circle barplot
enrichPlot(res = enrichdemo$results, 
           showCategory = 10, 
           type = 'circle')

# barplot
enrichPlot(res = enrichdemo$results, 
           showCategory = 10, 
           type = 'bar')

# dotplot
enrichPlot(res = enrichdemo$results, 
           showCategory = 10, 
           type = 'dot')

CeTF documentation built on Nov. 25, 2020, 2 a.m.