ccdb_ex: A preconstructed 'ContigClusterDB' from the 'contigs_qc' data
In CellaRepertorium: Data structures, clustering and testing for single cell immune receptor repertoires (scRNAseq RepSeq/AIRR-seq)
Description
Usage
Format
See Also
Description
A preconstructed ContigClusterDB from the contigs_qc data
Usage
1
Format
ccdb_ex = ContigCellDB_10XVDJ(contigs_qc, contig_pk = c('pop', 'sample', 'barcode', 'contig_id'), cell_pk = c('pop', 'sample', 'barcode'))
See Also
contigs_qc
CellaRepertorium documentation built on Nov. 8, 2020, 7:48 p.m.
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Description Usage Format See Also
Description
A preconstructed ContigClusterDB from the contigs_qc data
Usage
1 |
Format
ccdb_ex = ContigCellDB_10XVDJ(contigs_qc, contig_pk = c('pop', 'sample', 'barcode', 'contig_id'), cell_pk = c('pop', 'sample', 'barcode'))
See Also
contigs_qc
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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