annotation_axis_grob: Grob for Annotation Axis

In ComplexHeatmap: Make Complex Heatmaps

Description

Grob for Annotation Axis

Usage

annotation_axis_grob(at = NULL, labels = at, labels_rot = 0, gp = gpar(),
    side = "left", facing = "outside", direction = "normal", scale = NULL)

Arguments

at	Break values. If it is not specified, it is inferred from data scale in current viewport.
labels	Corresponding labels.
labels_rot	Rotations of labels.
gp	Graphic parameters.
side	side of the axis of the annotation viewport.
facing	Facing of the axis.
direction	Direction of the axis. Value should be "normal" or "reverse".
scale	The data scale. If it is NULL, it is inferred from current viewport.

Value

A grob object.

Examples

gb = annotation_axis_grob(at = 1:5, labels = month.name[1:5], labels_rot = 0, 
    side = "left", facing = "outside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "left", facing = "outside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:5, labels = month.name[1:5], labels_rot = 0, 
    side = "left", facing = "inside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "left", facing = "inside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:5, labels = month.name[1:5], labels_rot = 0, 
    side = "right", facing = "outside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "right", facing = "outside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:5, labels = month.name[1:5], labels_rot = 0, 
    side = "right", facing = "inside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "right", facing = "inside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:3, labels = month.name[1:3], labels_rot = 0, 
    side = "top", facing = "outside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "top", facing = "outside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:3, labels = month.name[1:3], labels_rot = 90, 
    side = "top", facing = "outside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "top", facing = "outside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:3, labels = month.name[1:3], labels_rot = 45, 
    side = "top", facing = "outside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "top", facing = "outside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:3, labels = month.name[1:3], labels_rot = 0, 
    side = "top", facing = "inside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "top", facing = "inside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:3, labels = month.name[1:3], labels_rot = 0, 
    side = "bottom", facing = "outside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "bottom", facing = "outside"')
grid.draw(gb)
popViewport()

gb = annotation_axis_grob(at = 1:3, labels = month.name[1:3], labels_rot = 0, 
    side = "bottom", facing = "inside")
grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
grid.rect()
grid.text('side = "bottom", facing = "inside"')
grid.draw(gb)
popViewport()

grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
gb = annotation_axis_grob(labels_rot = 0, side = "left", facing = "outside")
grid.rect()
grid.text('side = "left", facing = "outside"')
grid.draw(gb)
popViewport()

grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
gb = annotation_axis_grob(side = "left", direction = "reverse")
grid.rect()
grid.text('side = "left", direction = "reverse')
grid.draw(gb)
popViewport()

grid.newpage()
pushViewport(viewport(xscale = c(0, 4), yscale = c(0, 6), width = 0.6, height = 0.6))
gb = annotation_axis_grob(side = "bottom", direction = "reverse")
grid.rect()
grid.text('side = "bottom", directio = "reverse"')
grid.draw(gb)
popViewport()

ComplexHeatmap documentation built on Nov. 14, 2020, 2:01 a.m.