addCodonFrame: Internal CrispRVariants function for indicating codon frame...
In CrispRVariants: Tools for counting and visualising mutations in a target location
Description
Usage
Arguments
Value
Author(s)
View source: R/plotAlignments.R
Description
Adds vertical dotted lines in intervals of three nucleotides.
Codon frame is supplied, alignments are assumed not to span an intron-exon
junction.
Usage
1
addCodonFrame(p, width, codon.frame)
Arguments
p
A ggplot object, typically from CrispRVariants:::makeAlignmentTilePlot
width
The number of nucleotides in the alignments
codon.frame
The leftmost starting location of the next codon - 1,2,or 3
Value
A ggplot object with added vertical lines indicating the frame
Author(s)
Helen Lindsay
CrispRVariants documentation built on Nov. 8, 2020, 11:09 p.m.
R Package Documentation
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Description Usage Arguments Value Author(s)
View source: R/plotAlignments.R
Description
Adds vertical dotted lines in intervals of three nucleotides. Codon frame is supplied, alignments are assumed not to span an intron-exon junction.
Usage
1 | addCodonFrame(p, width, codon.frame)
|
Arguments
p |
A ggplot object, typically from CrispRVariants:::makeAlignmentTilePlot |
width |
The number of nucleotides in the alignments |
codon.frame |
The leftmost starting location of the next codon - 1,2,or 3 |
Value
A ggplot object with added vertical lines indicating the frame
Author(s)
Helen Lindsay
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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