getInsertionsTable: getInsertionsTable
In CrispRVariants: Tools for counting and visualising mutations in a target location
Description
Usage
Arguments
Value
Author(s)
View source: R/getInsertionsTable.R
Description
Returns a table of insertion sequences present in
a GAlignments object. This table is aggregated and used by
plotAlignments.
Usage
1
getInsertionsTable(alns, pos = 1L)
Arguments
alns
A GAlignments object
pos
(Integer(1)) The amount by which to shift genomic
coordinates upstream to get coordinates relative to a display region
Value
A data frame of insertion sequences, genomic and
relative locations
Author(s)
Helen Lindsay
CrispRVariants documentation built on Nov. 8, 2020, 11:09 p.m.
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Description Usage Arguments Value Author(s)
View source: R/getInsertionsTable.R
Description
Returns a table of insertion sequences present in a GAlignments object. This table is aggregated and used by plotAlignments.
Usage
1 | getInsertionsTable(alns, pos = 1L)
|
Arguments
alns |
A GAlignments object |
pos |
(Integer(1)) The amount by which to shift genomic coordinates upstream to get coordinates relative to a display region |
Value
A data frame of insertion sequences, genomic and relative locations
Author(s)
Helen Lindsay
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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