getAnnotationChoices: Retrieve all possible annotation values used in the...
In DAVIDQuery: Retrieval from the DAVID bioinformatics data resource into R

Description Usage Arguments Details Value Author(s) See Also Examples

Retrieve all possible annotation values used in the annotation report tool

1 2	getAnnotationChoices(urlBase=DAVIDURLBase, curl=RCurl::getCurlHandle(), verbose=TRUE)

`urlBase`	the DAVID main page url. Default is DAVIDURLBase.
`curl`	RCurl handle. Default is getCurlHandle()
`verbose`	if TRUE enables diagnostic messages

When the getAnnotationChoices gets called the first time within the R session, it retrieves the set of annotation values from the DAVID web services, stores them within the DAVIDAnnotChoices data structure and then reuses it in subsequent calls.

the list of possible annotation tags, i.e. GOTERM_MF_4, GOTERM_MF_5, BLOCKS_ID etc. used with the annotationReport tool.

Roger Day, Alex Lisovich

getIdConversionChoices, getAffyChipTypes, convertIDList, DAVIDQuery

## Not run: 
#retrieve annotation values
annotChoices<-getAnnotationChoices();
#display choice dialog
item<-menu(graphics = TRUE, title = "Select Identifier",  annotChoices$from[,"name"]);
#retrieve identifier for subsequent conversion
ident<-annotChoices$from[item,"value"];

## End(Not run)