DeconRNASeq: Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data

DeconSeq is an R package for deconvolution of heterogeneous tissues based on mRNA-Seq data. It modeled expression levels from heterogeneous cell populations in mRNA-Seq as the weighted average of expression from different constituting cell types and predicted cell type proportions of single expression profiles.

Package details

AuthorTing Gong <tinggong@gmail.com> Joseph D. Szustakowski <joseph.szustakowski@novartis.com>
Bioconductor views DifferentialExpression
MaintainerTing Gong <tinggong@gmail.com>
LicenseGPL-2
Version1.32.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DeconRNASeq")

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DeconRNASeq documentation built on Nov. 8, 2020, 7:51 p.m.