deepblue_list_experiments: list_experiments

Description Usage Arguments Value See Also Examples

View source: R/deepblue.R

Description

List the DeepBlue Experiments that matches the search criteria defined by this command parameters.

Usage

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deepblue_list_experiments(genome = NULL, type = NULL,
  epigenetic_mark = NULL, biosource = NULL, sample = NULL,
  technique = NULL, project = NULL,
  user_key = deepblue_options("user_key"))

Arguments

genome

- A string or a vector of string (the target genome)

type

- A string or a vector of string (type of the experiment: peaks or signal)

epigenetic_mark

- A string or a vector of string (name(s) of selected epigenetic mark(s))

biosource

- A string or a vector of string (name(s) of selected biosource(s))

sample

- A string or a vector of string (id(s) of selected sample(s))

technique

- A string or a vector of string (name(s) of selected technique(s))

project

- A string or a vector of string (name(s) of selected projects)

user_key

- A string (users token key)

Value

experiments - A array (experiment names and IDS)

See Also

Other Inserting and listing experiments: deepblue_collection_experiments_count, deepblue_faceting_experiments, deepblue_list_recent_experiments, deepblue_list_similar_experiments, deepblue_preview_experiment

Examples

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deepblue_list_experiments(genome = "hg19", type = "peaks",
  epigenetic_mark = "H3K27ac", biosource = "blood")

DeepBlueR documentation built on Nov. 8, 2020, 6:25 p.m.