build/examples/deepblue.aggregate.R

annotation_id = deepblue_select_annotations(
    annotation_name="CpG Islands",
    genome="hg19", chromosome="chr1")
data_id = deepblue_select_experiments(
    experiment_name="E002-H3K9ac.narrowPeak.bed")
deepblue_aggregate(
    data_id = data_id,
    ranges_id=annotation_id,
    column = "SCORE")

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DeepBlueR documentation built on Nov. 8, 2020, 6:25 p.m.