Description Usage Arguments Details Value Author(s) Examples
Plot expression of a single gene
1 | PlotExp(NormalizedData, Conditions, Name)
|
NormalizedData |
Expression data after adjusting for library size factors |
Conditions |
sample conditions |
Name |
name of the gene/isoform of interest |
PlotExp() function will generate line plots for genes or isoforms of interest.
PlotExp() funtion will generate line plots for genes or isoforms of interest.
Ning Leng
1 2 3 4 5 6 | data(GeneExampleData)
CondVector <- rep(paste("t",1:5,sep=""),each=3)
Conditions <- factor(CondVector, levels=c("t1","t2","t3","t4","t5"))
Sizes <- MedianNorm(GeneExampleData)
NormData <- GetNormalizedMat(GeneExampleData, Sizes)
PlotExp(NormData, Conditions, "Gene_1")
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