getIdMatchInfo: Retrieve the set of match pairs from the 'Entry' node of the...

In ENVISIONQuery: Retrieval from the ENVISION bioinformatics data portal into R

Description

Retrieve the set of match pairs from the 'Entry' node of the Enfin xml document.

Usage

getIdMatchInfo(entry, positiveResultIDs,
    participant.keyword="participant", attribute.keyword="attribute")

Arguments

entry	The 'Entry' node of the Enfin xml document.
positiveResultIDs	Set of 'ID' nodes of the Enfin xml document which contain the pair match information.
participant.keyword	The keyword identifying the match related information within the match top node. Default is "participant".
attribute.keyword	The keyword identifying the attribute related information within the pair match top node. Default is "attribute".

Value

The array consisting of two columns, the first containing the source ID set, and the second containing the match result

Author(s)

Alex Lisovich, Roger Day

ENVISIONQuery documentation built on Nov. 8, 2020, 5:25 p.m.