default_smooth_fun: Default Smoothing function
In EnrichedHeatmap: Making Enriched Heatmaps

Description Usage Arguments Details Author(s) Examples

Default Smoothing function

1	default_smooth_fun(x)

`x`	Input numeric vector.

The smoothing function is applied to every row in the normalized matrix. For this default smoothing function, locfit is first tried on the vector. If there is error, loess smoothing is tried afterwards. If both smoothing are failed, there will be an error.

Zuguang Gu <z.gu@dkfz.de>

1 2	# There is no example NULL

Loading required package: grid
Loading required package: ComplexHeatmap
Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, lengths, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
    rowMeans, rowSums, rownames, sapply, setdiff, sort, table, tapply,
    union, unique, unsplit, which, which.max, which.min

Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following object is masked from 'package:base':

    expand.grid

Loading required package: IRanges
Loading required package: GenomeInfoDb
Loading required package: locfit
locfit 1.5-9.1 	 2013-03-22

Attaching package: 'EnrichedHeatmap'

The following object is masked from 'package:ComplexHeatmap':

    +.AdditiveUnit

NULL