FunChIP: Clustering and Alignment of ChIP-Seq peaks based on their shapes

Preprocessing and smoothing of ChIP-Seq peaks and efficient implementation of the k-mean alignment algorithm to classify them.

Package details

AuthorAlice Parodi [aut, cre], Marco Morelli [aut, cre], Laura M. Sangalli [aut], Piercesare Secchi [aut], Simone Vantini [aut]
Bioconductor views ChIPSeq Clustering StatisticalMethod
MaintainerAlice Parodi <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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FunChIP documentation built on Nov. 8, 2020, 4:50 p.m.