FunChIP: Clustering and Alignment of ChIP-Seq peaks based on their shapes

Preprocessing and smoothing of ChIP-Seq peaks and efficient implementation of the k-mean alignment algorithm to classify them.

Package details

AuthorAlice Parodi [aut, cre], Marco Morelli [aut, cre], Laura M. Sangalli [aut], Piercesare Secchi [aut], Simone Vantini [aut]
Bioconductor views ChIPSeq Clustering StatisticalMethod
MaintainerAlice Parodi <[email protected]>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:

Try the FunChIP package in your browser

Any scripts or data that you put into this service are public.

FunChIP documentation built on Oct. 31, 2019, 8:51 a.m.