Files in FunChIP
Clustering and Alignment of ChIP-Seq peaks based on their shapes
NAMESPACE
DESCRIPTION
build/vignette.rds
src/peak.h
src/kmean_function.cpp
src/Makevars.win
src/Makevars
data/GR100.rda
data/peaks.rda
R/bending_index.R
R/choose.k.GRange.R
R/compute.d.GRange.R
R/distance.GRange.R
R/summit.GRange.R
R/pileup.peak.GRange.R
R/smooth.GRange.R
R/plot.GRange.R
R/silhouette_plot.R
R/cluster.GRange.R
vignettes/FunChIP.Rnw
vignettes/mybib.bib
man/pileup_peak-method.Rd
man/GR100.Rd
man/plot_peak-method.Rd
man/FunChIP-package.Rd
man/summit_peak-method.Rd
man/smooth_peak-method.Rd
man/silhouette_plot.Rd
man/compute_fragments_length.Rd
man/distance_peak.Rd
man/bending_index.Rd
man/cluster_peak-method.Rd
man/peaks.Rd
man/choose_k-method.Rd
inst/NEWS
inst/doc/FunChIP.pdf
inst/doc/FunChIP.R
inst/doc/FunChIP.Rnw
inst/extdata/test.bam
inst/extdata/test.bam.bai
