API for GOSim
Computation of functional similarities between GO terms and gene products; GO enrichment analysis

Global functions
GOGraph Man page Source code
GOenrichment Man page Source code
IC Man page
ICshumanBPall Man page
ICshumanCCall Man page
ICshumanMFall Man page
analyzeCluster Man page
calc.diffusion.kernel Man page Source code
calcICs Man page Source code
calcTermSim Man page Source code Source code
classificationModelSignalTrans_dme Man page
classificationModelSignalTrans_hsa Man page
classificationModel_dme Man page
evaluateClustering Man page Source code
filterGO Man page Source code
getAncestors Man page Source code
getChildren Man page Source code
getDensityFactor Man page Source code
getDepthFactor Man page Source code
getDisjAnc Man page Source code
getDisjCommAnc Man page Source code
getDisjCommAncSim Man page Source code
getEnrichedSim Man page Source code
getGIC Source code
getGOGraph Man page Source code
getGOGraphsGenes Man page Source code
getGOInfo Man page Source code
getGSim Man page Source code
getGeneFeatures Man page Source code
getGeneFeatures.internal Source code
getGeneFeaturesPrototypes Man page Source code
getGeneSim Man page Source code
getGeneSimPrototypes Man page Source code
getMinimumSubsumer Man page Source code
getOffsprings Man page Source code
getParents Man page Source code
getTermSim Man page Source code
getWeightedDotSim Source code
initialize Man page Source code
internal Man page
load.diffusion.kernel Man page Source code
norm Man page Source code
normalize.kernel Source code
pca Man page Source code
precomputeTermSims Man page Source code
selectPrototypes Man page Source code
setEnrichmentFactors Man page Source code
setEvidenceLevel Man page Source code
setOntology Man page Source code
GOSim documentation built on May 2, 2018, 2:52 a.m.