getAncestors: get list of ALL ancestors associated to each GO term
In GOSim: Computation of functional similarities between GO terms and gene products; GO enrichment analysis
Description
Usage
Value
Note
Author(s)
See Also
Examples
Description
Returns the list of all (also indirect) ancestors (= less specific terms) associated to each GO term. The type of relationship between GO terms ("is a" or "part of") is ignored.
Usage
1
Value
List with entry names for each GO term. Each entry contains a character
vector with the ancestor GO terms.
Note
The result is computed within the currently set ontology
("BP","MF","CC"). It directly uses the "GO" library to compute the
result.
Author(s)
Holger Froehlich
See Also
getOffsprings, getChildren, getParents, setOntology
Examples
1
GOSim documentation built on Nov. 8, 2020, 11:05 p.m.
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Description Usage Value Note Author(s) See Also Examples
Description
Returns the list of all (also indirect) ancestors (= less specific terms) associated to each GO term. The type of relationship between GO terms ("is a" or "part of") is ignored.
Usage
1 |
Value
List with entry names for each GO term. Each entry contains a character vector with the ancestor GO terms.
Note
The result is computed within the currently set ontology ("BP","MF","CC"). It directly uses the "GO" library to compute the result.
Author(s)
Holger Froehlich
See Also
getOffsprings, getChildren, getParents, setOntology
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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