getAncestors: get list of ALL ancestors associated to each GO term

Description Usage Value Note Author(s) See Also Examples

View source: R/general.R

Description

Returns the list of all (also indirect) ancestors (= less specific terms) associated to each GO term. The type of relationship between GO terms ("is a" or "part of") is ignored.

Usage

1

Value

List with entry names for each GO term. Each entry contains a character vector with the ancestor GO terms.

Note

The result is computed within the currently set ontology ("BP","MF","CC"). It directly uses the "GO" library to compute the result.

Author(s)

Holger Froehlich

See Also

getOffsprings, getChildren, getParents, setOntology

Examples

1

GOSim documentation built on Nov. 1, 2018, 2:26 a.m.