Files in GOSim
Computation of functional similarities between GO terms and gene products; GO enrichment analysis
NAMESPACE
DESCRIPTION
build/vignette.rds
src/hungarian2.h
src/Makevars
src/OAWrapper.cpp
src/hungarian2.c
data/ICsCChumanall.rda
data/ICsBPhumanall.rda
data/ICsMFhumanall.rda
R/geneSimilarity.R
R/GOenrichment.R
R/pca.R
R/clusterEvaluation.R
R/general.R
R/termSimilarity.R
R/normalize.kernel.R
R/norm.R
R/manifold_embedding.R
vignettes/GOPCAExample.pdf
vignettes/GOClustersil.pdf
vignettes/GOClusterExample.pdf
vignettes/GOExample.pdf
vignettes/GOSim.Rnw
vignettes/references.bib
man/getGeneFeaturesPrototypes.Rd
man/calcICs.Rd
man/internal.Rd
man/getTermSim.Rd
man/getGeneSimPrototypes.Rd
man/getGeneFeatures.Rd
man/calc.diffusion.kernel.Rd
man/getParents.Rd
man/getChildren.Rd
man/getAncestors.Rd
man/getGeneSim.Rd
man/getGOGraph.Rd
man/setEnrichmentFactors.Rd
man/setEvidenceLevel.Rd
man/getMinimumSubsumer.Rd
man/selectPrototypes.Rd
man/getGOInfo.Rd
man/setOntology.Rd
man/GOenrichment.Rd
man/getOffsprings.Rd
man/IC.Rd
man/getDisjCommAnc.Rd
man/evaluateClustering.Rd
man/filterGO.Rd
inst/CITATION
inst/doc/GOSim.R
inst/doc/GOSim.Rnw
inst/doc/GOSim.pdf
