getDisjCommAnc: Get disjoint common ancestors.
In GOSim: Computation of functional similarities between GO terms and gene products; GO enrichment analysis
Description
Usage
Arguments
Details
Value
Author(s)
References
See Also
Examples
View source: R/termSimilarity.R
Description
Returns the GO terms representing the disjoint common ancestors of two GO terms.
Usage
1
getDisjCommAnc(term1, term2)
Arguments
term1
GO term 1
term2
GO term 2
Details
The result is computed within the currently set ontology ("BP","MF","CC").
Value
Character vector of GO terms
Author(s)
Holger Froehlich
References
Couto, F.; Silva, M. & Coutinho, P., Semantic Similarity over the Gene Ontology: Family Correlation and Selecting Disjunctive Ancestors, Conference in Information and Knowledge Management, 2005
See Also
getTermSim,getGOGraph, setOntology
Examples
1
getDisjCommAnc("GO:0006955","GO:0007584")
GOSim documentation built on Nov. 8, 2020, 11:05 p.m.
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Description Usage Arguments Details Value Author(s) References See Also Examples
View source: R/termSimilarity.R
Description
Returns the GO terms representing the disjoint common ancestors of two GO terms.
Usage
1 | getDisjCommAnc(term1, term2)
|
Arguments
term1 |
GO term 1 |
term2 |
GO term 2 |
Details
The result is computed within the currently set ontology ("BP","MF","CC").
Value
Character vector of GO terms
Author(s)
Holger Froehlich
References
Couto, F.; Silva, M. & Coutinho, P., Semantic Similarity over the Gene Ontology: Family Correlation and Selecting Disjunctive Ancestors, Conference in Information and Knowledge Management, 2005
See Also
getTermSim,getGOGraph, setOntology
Examples
1 | getDisjCommAnc("GO:0006955","GO:0007584")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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