API for GRENITS
Gene Regulatory Network Inference Using Time Series
| Global functions | |
|---|---|
| .Fpareto | Source code |
| .analyseLinear | Source code |
| .analyseNonLinear | Source code |
| .analyseReps_Gauss | Source code |
| .analyseReps_Student | Source code |
| .checkChainExists | Source code |
| .dpareto | Source code |
| .getSquareMatIndicesFromFlat | Source code |
| .heatMap.ggplot | Source code |
| .lablesGammaChain | Source code |
| .linkConvergenceMessage | Source code |
| .makeFixedGammasMat | Source code |
| .marginalUncertaintyPlot | Source code |
| .paramVecType | Source code |
| .plot.reconst | Source code |
| .plotCutOffGammas | Source code |
| .plotDistribAndPriorTau.sepSelf | Source code |
| .plotDistribParents.LargeMat | Source code |
| .plotDistribWithGammaPrior | Source code |
| .plotPriorsErrorGauss | Source code |
| .plotPriorsErrorStudent | Source code |
| .plotPriorsLinear | Source code |
| .plotPriorsNonLinear | Source code |
| .plotSplinesFunctions | Source code |
| .read.linear.chain | Source code |
| .read.reps_gauss.chain | Source code |
| .read.reps_student.chain | Source code |
| .read.splines.chain | Source code |
| .readFast | Source code |
| .readGammaFile_Return_MeanAndNumParents_c | Source code |
| .readLargeFileReturnMean | Source code |
| .readLargeFileReturnMean_c | Source code |
| .remove_trailingSlash | Source code |
| .tauON | Source code |
| .writeGeneNames | Source code |
| Athaliana_ODE | Man page |
| Athaliana_ODE_4NoiseReps | Man page |
| LinearNet | Man page Source code |
| NonLinearNet | Man page Source code |
| ReplicatesNet_gauss | Man page Source code |
| ReplicatesNet_student | Man page Source code |
| analyse.output | Man page Source code |
| mcmc.defaultParams_Linear | Man page Source code |
| mcmc.defaultParams_gauss | Man page Source code |
| mcmc.defaultParams_nonLinear | Man page Source code |
| mcmc.defaultParams_student | Man page Source code |
| plotPriors | Man page Source code |
| read.chain | Man page Source code |
