LBE: Estimation of the false discovery rate.

LBE is an efficient procedure for estimating the proportion of true null hypotheses, the false discovery rate (and so the q-values) in the framework of estimating procedures based on the marginal distribution of the p-values without assumption for the alternative hypothesis.

Author
Cyril Dalmasso
Date of publication
None
Maintainer
Cyril Dalmasso <dalmasso@vjf.inserm.fr>
License
GPL-2
Version
1.42.0

View on Bioconductor

Man pages

golub.pval
p-values corresponding to the gene expression data from Golub...
hedenfalk.pval
p-values corresponding to the gene expression data from...
LBE
Estimation of the false discovery rate.
LBEa
Optimal setting for the parameter a
LBE-package
Estimation of the proportion of true null hypotheses, the...
LBEplot
Graphical display of LBE objects.
LBEsummary
Display LBE object
LBEwrite
Write the results of an LBE object to a file.

Files in this package

LBE/DESCRIPTION
LBE/NAMESPACE
LBE/R
LBE/R/LBE.R
LBE/R/LBEa.R
LBE/R/LBEplot.R
LBE/R/LBEsummary.R
LBE/R/LBEwrite.R
LBE/build
LBE/build/vignette.rds
LBE/data
LBE/data/golub.pval.rda
LBE/data/hedenfalk.pval.rda
LBE/inst
LBE/inst/doc
LBE/inst/doc/LBE.R
LBE/inst/doc/LBE.Rnw
LBE/inst/doc/LBE.pdf
LBE/man
LBE/man/LBE-package.Rd
LBE/man/LBE.Rd
LBE/man/LBEa.Rd
LBE/man/LBEplot.Rd
LBE/man/LBEsummary.Rd
LBE/man/LBEwrite.Rd
LBE/man/golub.pval.Rd
LBE/man/hedenfalk.pval.Rd
LBE/vignettes
LBE/vignettes/LBE.Rnw