LBEwrite: Write the results of an LBE object to a file.

In LBE: Estimation of the false discovery rate.

Description

Write the results of an LBE object to a file.

Usage

LBEwrite(LBEobj, filename = "LBE-results.txt")

Arguments

LBEobj	LBE object
filename	Output filename (optional)

Details

The output file lists the estimate of pi0, which is the proportion of true null hypotheses. It also lists each p-value and corresponding q-value, one per line. If an FDR significance level was specified in the call to qvalue, the significance level is printed below the estimate of pi0, and an indicator of significance is included as a third column for each p-value and q-value.

Note

The function LBEwrite is analogous to the function qwrite from the package qvalue.

Author(s)

Cyril Dalmasso

See Also

LBE, LBEplot, LBEsummary, LBEa

Examples

## start
data(hedenfalk.pval)
res<-LBE(hedenfalk.pval)
LBEwrite(res,filename="myresults.txt")
## end

LBE documentation built on Nov. 8, 2020, 5:58 p.m.