hedenfalk.pval: p-values corresponding to the gene expression data from...
In LBE: Estimation of the false discovery rate.
Description
Usage
Format
References
Description
The aim of the study of Hedenfalk et al. (2001) was to examine breast-cancer tissues from patients with BRCA1-BRCA2 related cancer and cases of sporadic breast cancer to determine global gene expression patterns in the different classes of tumours. Here, we focus on the comparison of BRCA1 and BRCA2. The p-values provided here are the same as those provided with the package qvalue. They were otained from a two-sample t-test analysis on a subset of 3,170 genes, as described in Storey and Tibshirani (2003).
Usage
1
Format
The format is:
num [1:3170] 0.0121 0.0750 0.9949 0.0418 0.8458 ...
References
Hedenfalk I, Duggan D, Chen Y, Radmacher M, Bittner M, Simon R, Meltzer P, Guterson B, Esteller M, Kallioniemi OP et al. (2001) Gene-expression profiles in hereditary breast cancer. N Engl J Med, 22, 539-548.
Storey JD and Tibshirani R. (2003). Statistical significance for genome-wide studies. Proc Natl Acad Sci, 100, 9440-9445.
LBE documentation built on Nov. 8, 2020, 5:58 p.m.
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Description Usage Format References
Description
The aim of the study of Hedenfalk et al. (2001) was to examine breast-cancer tissues from patients with BRCA1-BRCA2 related cancer and cases of sporadic breast cancer to determine global gene expression patterns in the different classes of tumours. Here, we focus on the comparison of BRCA1 and BRCA2. The p-values provided here are the same as those provided with the package qvalue. They were otained from a two-sample t-test analysis on a subset of 3,170 genes, as described in Storey and Tibshirani (2003).
Usage
1 |
Format
The format is: num [1:3170] 0.0121 0.0750 0.9949 0.0418 0.8458 ...
References
Hedenfalk I, Duggan D, Chen Y, Radmacher M, Bittner M, Simon R, Meltzer P, Guterson B, Esteller M, Kallioniemi OP et al. (2001) Gene-expression profiles in hereditary breast cancer. N Engl J Med, 22, 539-548.
Storey JD and Tibshirani R. (2003). Statistical significance for genome-wide studies. Proc Natl Acad Sci, 100, 9440-9445.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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