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Model-based Analysis of Single Cell Transcriptomics

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bootVcov1: Bootstrap a zlmfit

bootVcov1: Bootstrap a zlmfit
In MAST: Model-based Analysis of Single Cell Transcriptomics

Description Usage Arguments Value Examples

View source: R/ZlmFit-bootstrap.R

Description

Sample cells with replacement to find bootstrapped distribution of coefficients

Usage

1
bootVcov1(zlmfit, R = 99)

Arguments

zlmfit

class ZlmFit

R

number of bootstrap replicates

Value

array of bootstrapped coefficients

Examples

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data(vbetaFA)
zlmVbeta <- zlm(~ Stim.Condition, subset(vbetaFA, ncells==1)[1:5,])
#Only run 3 boot straps, which you wouldn't ever want to do in practice...
bootVcov1(zlmVbeta, R=3)

MAST documentation built on Nov. 8, 2020, 8:19 p.m.

Related to bootVcov1 in MAST...

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Package overview README.md Interoptability between MAST and SingleCellExperiment-derived packages. MAST Intro Using MAST with RNASeq: MAIT Analysis.

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