Description Usage Arguments Value Functions Examples
View source: R/Fluidigm-methods.R
freq
returns the frequency of expression, i.e., the proportion of non-zero values in sc
.
NAs can be optionally removed
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sc |
SingleCellAssay |
na.rm |
should NAs be removed, or carried through? |
vector of proportions
condmean
: Report the mean non-zero expression value for each gene. NAs are always removed.
condSd
: Report standard deviation of expression, for positive et for each gene. NAs are always removed.
numexp
: Report number of expressing cells ($>0$) per gene. NAs are removed.
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