Description Usage Arguments Value
View source: R/ebayes-helpers.R
ebayesControl
is a named list with (optional) components 'method' (one of 'MOM' or 'MLE') and 'model' (one of 'H0' or 'H1')
method MOM uses a method-of-moments estimator, while MLE using the marginal likelihood.
H0 model estimates the precisions using the intercept alone in each gene, while H1 fits the full model specified by formula
1 |
sca |
|
ebayesControl |
list with (optional) components 'method', 'model'. See details. |
Formula |
a formula (using variables in |
truncate |
Genes with sample precisions exceeding this value are discarded when estimating the hyper parameters |
numeric
of length two, giving the hyperparameters in terms of a variance (v
) and prior observations (df
), inside a structure
, with component hess
, giving the Fisher Information of the hyperparameters.
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