impute: impute missing continuous expression for plotting
In MAST: Model-based Analysis of Single Cell Transcriptomics
Description
Usage
Arguments
Value
Examples
Description
If there are no positive observations for a contrast, it is generally not estimible.
However, for the purposes of testing we can replace it with the least favorable value with respect to the contrasts that are defined.
Usage
1
impute(object, groupby)
Arguments
object
Output of predict
groupby
Variables (column names in predict) to group by for imputation (facets of the plot)
Value
data.table
Examples
1
2
MAST documentation built on Nov. 8, 2020, 8:19 p.m.
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Description Usage Arguments Value Examples
Description
If there are no positive observations for a contrast, it is generally not estimible. However, for the purposes of testing we can replace it with the least favorable value with respect to the contrasts that are defined.
Usage
1 | impute(object, groupby)
|
Arguments
object |
Output of predict |
groupby |
Variables (column names in predict) to group by for imputation (facets of the plot) |
Value
data.table
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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