MMDiff2: Statistical Testing for ChIP-Seq data sets

This package detects statistically significant differences between read enrichment profiles in different ChIP-Seq samples. To take advantage of shape differences it uses Kernel methods (Maximum Mean Discrepancy, MMD).

Package details

AuthorGabriele Schweikert [cre, aut], David Kuo [aut]
Bioconductor views ChIPSeq DifferentialPeakCalling Sequencing Software
MaintainerGabriele Schweikert <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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MMDiff2 documentation built on Nov. 8, 2020, 11:03 p.m.