fit_stand_feature: Fit lm and standardize all features
In MMUPHin: Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies
Description
Usage
Arguments
Value
View source: R/helpers_adjust_batch.R
Description
Fit lm and standardize all features
Usage
1
fit_stand_feature(s_data, design, l_ind)
Arguments
s_data
feature-by-sample matrix of abundances (proportions or
counts).
design
design matrix.
l_ind
list of indicator matrices, as returned by construct_ind.
Value
list of two componet: the standardized feature abundance matrix, and
a list of per-feature standardization fits.
MMUPHin documentation built on April 9, 2021, 6:01 p.m.
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Description Usage Arguments Value
View source: R/helpers_adjust_batch.R
Description
Fit lm and standardize all features
Usage
1 | fit_stand_feature(s_data, design, l_ind)
|
Arguments
s_data |
feature-by-sample matrix of abundances (proportions or counts). |
design |
design matrix. |
l_ind |
list of indicator matrices, as returned by construct_ind. |
Value
list of two componet: the standardized feature abundance matrix, and a list of per-feature standardization fits.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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