relocate_scale: Relocate and scale feature abundances to correct for batch...
In MMUPHin: Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies

Relocate and scale feature abundances to correct for batch effects, given shrinked per-batch location and scale parameters

1	relocate_scale(s_data, l_params_shrink, batchmod, n_batch, l_ind)

`s_data`	feature-by-sample matrix of standardized abundances.
`l_params_shrink`	list of shrinked parameters, as returned by fit_shrink.
`batchmod`	design matrix for batch variables.
`n_batch`	number of batches in the data.
`l_ind`	list of indicator matrices, as returned by construct_ind.

feature-by-sample matrix of batch-adjusted feature abundances (but without covariate effects).

MMUPHin documentation built on April 9, 2021, 6:01 p.m.

MMUPHin index

Performing meta-analyses of microbiome studies with MMUPHin

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