MSnbase: Base Functions and Classes for Mass Spectrometry and Proteomics

MSnbase provides infrastructure for manipulation, processing and visualisation of mass spectrometry and proteomics data, ranging from raw to quantitative and annotated data.

README.md A short introduction to *MSnbase* development MSnbase benchmarking MSnbase: centroiding of profile-mode MS data MSnbase IO capabilities MSnbase: MS data processing, visualisation and quantification

Vignettes Man pages API and functions Files

Package details
Author	Laurent Gatto, Johannes Rainer and Sebastian Gibb with contributions from Guangchuang Yu, Samuel Wieczorek, Vasile-Cosmin Lazar, Vladislav Petyuk, Thomas Naake, Richie Cotton, Arne Smits, Martina Fisher, Ludger Goeminne, Adriaan Sticker and Lieven Clement.
Bioconductor views	DataImport ImmunoOncology Infrastructure MassSpectrometry Proteomics QualityControl
Maintainer	Laurent Gatto <laurent.gatto@uclouvain.be>
License	Artistic-2.0
Version	2.16.1
URL	https://lgatto.github.io/MSnbase
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("MSnbase")`