dot-cleanRawMaxQuant: Clean raw output from MaxQuant
In MSstatsConvert: Import Data from Various Mass Spectrometry Signal Processing Tools to MSstats Format
Description
Usage
Arguments
Value
Description
Clean raw output from MaxQuant
Usage
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.cleanRawMaxQuant(
msstats_object,
protein_id_col,
remove_by_site = FALSE,
channel_columns = "Reporterintensitycorrected"
)
Arguments
msstats_object
object that inherits from MSstatsInputFiles class.
protein_id_col
character, name of a column with names of proteins.
remove_by_site
logical, if TRUE, proteins only identified by site will
be removed.
channel_columns
character, regular expression that identifies channel columns
in TMT data.
Value
data.table
MSstatsConvert documentation built on Nov. 8, 2020, 5:49 p.m.
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Description Usage Arguments Value
Description
Clean raw output from MaxQuant
Usage
1 2 3 4 5 6 | .cleanRawMaxQuant(
msstats_object,
protein_id_col,
remove_by_site = FALSE,
channel_columns = "Reporterintensitycorrected"
)
|
Arguments
msstats_object |
object that inherits from MSstatsInputFiles class. |
protein_id_col |
character, name of a column with names of proteins. |
remove_by_site |
logical, if TRUE, proteins only identified by site will be removed. |
channel_columns |
character, regular expression that identifies channel columns in TMT data. |
Value
data.table
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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