dot-makeScoreFilterMessage: Make a message about filtering based on a score

In MSstatsConvert: Import Data from Various Mass Spectrometry Signal Processing Tools to MSstats Format

Description

Make a message about filtering based on a score

Usage

.makeScoreFilterMessage(
  score_column,
  score_threshold,
  direction,
  behavior,
  fill_value
)

Arguments

score_column	chr, name of the column that contains scores.
score_threshold	num, values below or above this threshold will be removed from the data.
direction	chr, if "greater" only values above the threshold will be retained, if "smaller" - below the threshold.
behavior	chr, if "remove", values below/above the threshold will be removed, if "replace", they will be set to fill_value.
fill_value	if behavior = "replace", values below/above the threshold will be replaced with fill_value. Defaults to NA.

Value

character - message

MSstatsConvert documentation built on Nov. 8, 2020, 5:49 p.m.