Files in MetaboSignal
MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways
MetaboSignal.Rproj
README.md
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
data/hpaNormalTissue.rda
data/ppiNet_example.rda
data/mergedNet_example.rda
data/MetaboSignal_table.rda
data/keggNet_example.rda
data/kegg_pathways.rda
data/regulatory_interactions.rda
data/directionality_reactions.rda
R/MS_tissueFilter.R
R/MS_exportCytoscape.R
R/Find_support_functions.R
R/MS_reactionNetwork.R
R/signaling_matrix.R
R/Other_support_functions.R
R/General_internal_functions.R
R/metabolic_matrix.R
R/MS_keggNetwork.R
R/Regulatory_networks.R
R/MS_shortestPathsNetwork.R
R/MS_distances.R
vignettes/MetaboSignal2.Rmd
vignettes/template.csl
vignettes/mystyle.css
vignettes/MetaboSignal.Rmd
vignettes/knitcitations.bib
vignettes/figures/network2.png
vignettes/figures/network.png
man/mergedNet_example.Rd
man/MS_keggFinder.Rd
man/MS_topologyFilter.Rd
man/MS_exportCytoscape.Rd
man/MS_removeNode.Rd
man/hpaNormalTissue.Rd
man/kegg_pathways.Rd
man/MS_distances.Rd
man/MS_shortestPaths.Rd
man/regulatory_interactions.Rd
man/MS2_ppiNetwork.Rd
man/MS_keggNetwork.Rd
man/MS_tissueFilter.Rd
man/MS_findMappedNodes.Rd
man/MS_reactionNetwork.Rd
man/MS2_mergeNetworks.Rd
man/MetaboSignal_table.Rd
man/MS_shortestPathsNetwork.Rd
man/MS_nodeBW.Rd
man/directionality_reactions.Rd
man/ppiNet_example.Rd
man/MS_removeDrugs.Rd
man/MS_convertGene.Rd
man/MS_changeNames.Rd
man/keggNet_example.Rd
man/MS_replaceNode.Rd
man/MS_getPathIds.Rd
tests/runTests.R
inst/CITATION
inst/doc/MetaboSignal2.R
inst/doc/MetaboSignal2.Rmd
inst/doc/MetaboSignal.R
inst/doc/MetaboSignal2.html
inst/doc/MetaboSignal.html
inst/doc/MetaboSignal.Rmd
inst/unitTests/test_MetaboSignal.R
