Files in MetaboSignal
MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways

MetaboSignal.Rproj
NEWS
NAMESPACE
DESCRIPTION
README.md
inst/CITATION
inst/doc/MetaboSignal.Rmd
inst/doc/MetaboSignal.html
inst/doc/MetaboSignal2.html
inst/doc/MetaboSignal2.R inst/doc/MetaboSignal.R inst/doc/MetaboSignal2.Rmd inst/unitTests/test_MetaboSignal.R
vignettes/mystyle.css
vignettes/knitcitations.bib
vignettes/template.csl
vignettes/MetaboSignal.Rmd vignettes/MetaboSignal2.Rmd
vignettes/figures/network.png
vignettes/figures/network2.png
R/metabolic_matrix.R R/Regulatory_networks.R R/General_internal_functions.R R/Other_support_functions.R R/MS_shortestPathsNetwork.R R/signaling_matrix.R R/MS_keggNetwork.R R/Find_support_functions.R R/MS_distances.R R/MS_tissueFilter.R R/MS_exportCytoscape.R
build/vignette.rds
tests/runTests.R
data/regulatory_interactions.rda
data/mergedNet_example.rda
data/ppiNet_example.rda
data/MetaboSignal_table.rda
data/keggNet_example.rda
data/hpaNormalTissue.rda
data/datalist
data/kegg_pathways.rda
data/directionality_reactions.rda
man/kegg_pathways.Rd man/MS_shortestPaths.Rd man/MS_findMappedNodes.Rd man/MS_convertGene.Rd man/MS_getPathIds.Rd man/MetaboSignal_table.Rd man/directionality_reactions.Rd man/keggNet_example.Rd man/MS_replaceNode.Rd man/MS2_ppiNetwork.Rd man/regulatory_interactions.Rd man/mergedNet_example.Rd man/MS_removeDrugs.Rd man/MS_keggNetwork.Rd man/MS_removeNode.Rd man/MS_exportCytoscape.Rd man/hpaNormalTissue.Rd man/MS_topologyFilter.Rd man/MS2_mergeNetworks.Rd man/MS_nodeBW.Rd man/MS_distances.Rd man/MS_changeNames.Rd man/MS_keggFinder.Rd man/MS_shortestPathsNetwork.Rd man/ppiNet_example.Rd man/MS_tissueFilter.Rd
MetaboSignal documentation built on Nov. 17, 2017, 1:54 p.m.