Description Usage Arguments Value Note Examples
View source: R/MS_reactionNetwork.R
This function generates a directed reaction-compound network. The network is formalized as a three-column matrix, where each row represents an edge connecting two nodes (from source to target).
character vector containing the KEGG IDs of the metabolic pathways of interest. See functions "MS_keggFinder( )" and "MS_getPathIds( )".
A three-column matrix where each row represents an edge between two nodes.
Reaction directionality reported in KEGG has been cross-validated with published literature (Duarte et al., 2007).
reaction_network <- MS_reactionNetwork(metabo_paths = c("rno00010", "rno00562"))
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