MS_nodeBW: Get distribution of node betweeness
In MetaboSignal: MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways
Description
Usage
Arguments
Value
References
Examples
View source: R/Other_support_functions.R
Description
This function calculates the betweenness of each node of the network.
Usage
1
Arguments
network_table
three-column matrix where each row represents and edge
between two nodes. See function "MS_keggNetwork( )".
mode
character constant indicating whether a directed ("out") or
undirected ("all") network will be considered.
normalized
logical scalar indicating whether to normalize the betweeness
scores. If TRUE, normalized betweenness scores will be returned. If FALSE, raw
betweenness scores will be returned.
Value
A numeric vector containing the betweenness of each node of the network. The
function also produces and histogram showing the distribution of node betweenness.
References
Csardi, G. & Nepusz, T. (2006). The igraph software package for complex network
research. InterJournal, Complex Systems, 1695.
Examples
1
2
MetaboSignal documentation built on Nov. 8, 2020, 6 p.m.
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Description Usage Arguments Value References Examples
View source: R/Other_support_functions.R
Description
This function calculates the betweenness of each node of the network.
Usage
1 |
Arguments
network_table |
three-column matrix where each row represents and edge between two nodes. See function "MS_keggNetwork( )". |
mode |
character constant indicating whether a directed ("out") or undirected ("all") network will be considered. |
normalized |
logical scalar indicating whether to normalize the betweeness scores. If TRUE, normalized betweenness scores will be returned. If FALSE, raw betweenness scores will be returned. |
Value
A numeric vector containing the betweenness of each node of the network. The function also produces and histogram showing the distribution of node betweenness.
References
Csardi, G. & Nepusz, T. (2006). The igraph software package for complex network research. InterJournal, Complex Systems, 1695.
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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